ClearVolume is an open source real-time live 3D visualization library designed for high-end volumetric light sheet microscopes. ClearVolume enables the live visualization of microscope data - allowing the biologists to immediately decide whether a sample is worth imaging. ClearVolume can easily be integrated into existing Java, C/C++, Python, or LabVIEW based microscope software. It has a dedicated interface to MicroManager/OpenSpim/OpenSpin control software. ClearVolume supports multi-channels, live 3D data streaming from remote microscopes, and uses a multi-pass Fibonacci rendering algorithm that can handle large volumes. Moreover, ClearVolume is integrated into the FiJi/ImageJ2/KNIME ecosystem.
See also FiJi KNIME Light sheet fluorescence microscopy Volume rendering
References
External links Website of the open source ClearVolume project with links to the wiki, code repositories and issue tracking. ClearVolume KNIME plugin project page. ClearVolume FiJi plugin project page.